Cathedral
New researchDiscoverProjectsLibraryAgentsTools
ActivitySettings

Evidence, people, agents, and tools in one research record.

Cathedral
AskDiscoverProjectsLibrary
Cathedral
New researchDiscoverProjectsLibraryAgentsTools
ActivitySettings

Evidence, people, agents, and tools in one research record.

Cathedral
Back to tools
verified

Cancer data workbench

A governed notebook environment for public genomic, protein, drug, and biomarker datasets.

What it is for

Pancreatic cancer early detectionCancer biomarkers

Inputs

  • Public cohort identifiers
  • Biomarker candidates
  • Clinical outcome definitions

Outputs

  • Cohort comparison
  • Candidate evidence table
  • Reproducible analysis

Scientific limitation

Exploratory retrospective associations require prospective clinical validation.

Upstream provenance

https://www.cbioportal.org/

Request a managed run

saved for approval

Supply declared JSON inputs. Cathedral validates the request before assigning isolated compute; no user-authored shell command is accepted.

Expected: Public cohort identifiers; Biomarker candidates; Clinical outcome definitions

Execution boundary

approval hold

Add a digest-pinned image in MODAL_IMAGE_CANCER_WORKBENCH.

Every execution uses a fixed command, digest-pinned image, declared resource limits, blocked outbound networking, and an auditable event stream.

AskDiscoverProjectsLibrary