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Research query
Ask across papers, not against an empty page.
Cathedral fetches live papers from arXiv, Crossref, PubMed/NCBI, Semantic Scholar, and Europe PMC, then ranks the evidence, exposes the source text, and turns the question into contributable work.
Recent antimalarial drug discovery has been a race to produce new medicines that overcome emerging drug resistance, whilst considering safety and improving dosing convenience. Discovery efforts have yielded a variety of new molecules, many with novel modes of action, and the most advanced are in late-stage clinical development. These discoveries have led to a deeper understanding of how antimalarial drugs act, the identification of a new generati
162
title match / abstract match
europe-pmc
2023-08-31
158 cites
Pengxing Cao, Nectarios Klonis, Sophie Zaloumis, Con Dogovski +7
Artemisinin resistance constitutes a major threat to the continued success of control programs for malaria. With alternative antimalarial drugs not yet available, improving our understanding of how artemisinin-based drugs act and how resistance manifests is essential to enable optimisation of dosing regimens in order to prolong the lifespan of current first-line treatment options. Here, through introduction of a novel model of the dynamics of the
138
title match / abstract match
arxiv
2016-12-01
0 cites
Christopher Nötzel, Björn F. C. Kafsack
ABSTRACT
Recent advances in curbing the deadly toll of malaria have been threatened by the emergence of parasites resistant to the front-line antimalarial artemisinin. Resistance is mediated by point-mutations in the parasite protein Kelch13, but the mechanism of resistance is multi-factorial and only partially understood. Resistance-conferring Kelch13 mutations have been shown to lead to low-level activation of the parasite’s int
127
title match / abstract match
crossref
2022-01-28
1 cites
Cerqueira GC, Cheeseman IH, Schaffner SF, Nair S +9
Artemisinin-based combination therapies are the first line of treatment for Plasmodium falciparum infections worldwide, but artemisinin resistance has risen rapidly in Southeast Asia over the past decade. Mutations in the kelch13 gene have been implicated in this resistance. We used longitudinal genomic surveillance to detect signals in kelch13 and other loci that contribute to artemisinin or partner drug resistance. We retrospectively sequenced
127
title match / abstract match
pubmed
2017-04-27
0 cites
Li Q, Liu T, Lv K, Liao F +3
Malaria, caused by Plasmodium parasites and transmitted by Anopheles mosquitoes, greatly impacts public health and socioeconomic development, particularly in sub-Saharan African countries. Despite advances in malaria treatment and prevention, the number of clinical cases and deaths have increased in recent years. The complex life cycle and genetic diversity of Plasmodium parasites pose significant challenges in drug and vaccine development, parti
112
abstract match / claim overlap
europe-pmc
2025-06-17
10 cites
Frank Seeber
Faculty Opinions recommendation of Drug resistance. K13-propeller mutations confer artemisinin resistance in Plasmodium falciparum clinical isolates. was ingested from crossref.
100
title match
crossref
2016-05-27
0 cites
Brown AC, Warthan MD, Aryal A, Liu S +1
Mounting evidence demonstrates that nutritional environment can alter pathogen drug sensitivity. While the rich media used for in vitro culture contains supraphysiological nutrient concentrations, pathogens encounter a relatively restrictive environment in vivo . We assessed the effect of nutrient limitation on the protozoan parasite that causes malaria and demonstrated that short-term growth under physiologically relevant mild nutrient stress (o
90
title match / abstract match
pubmed
2023-06-26
0 cites
Tropsha A, Isayev O, Varnek A, Schneider G +1
Quantitative structure-activity relationship (QSAR) modelling, an approach that was introduced 60 years ago, is widely used in computer-aided drug design. In recent years, progress in artificial intelligence techniques, such as deep learning, the rapid growth of databases of molecules for virtual screening and dramatic improvements in computational power have supported the emergence of a new field of QSAR applications that we term 'deep QSAR'. Ma
84
title match / abstract match
pubmed
2024-01-31
0 cites
Namkyeong Lee, Edward De Brouwer, Ehsan Hajiramezanali, Tommaso Biancalani +2
Recent advances in large language models (LLMs) have shown great potential to accelerate drug discovery. However, the specialized nature of biochemical data often necessitates costly domain-specific fine-tuning, posing major challenges. First, it hinders the application of more flexible general-purpose LLMs for cutting-edge drug discovery tasks. More importantly, it limits the rapid integration of the vast amounts of scientific data continuously
83
title match / abstract match
arxiv
2025-02-22
0 cites
Sukhpal Singh Gill, Oktay Cetinkaya, Stefano Marrone, Daniel Claudino +13
The recent development of quantum computing, which uses entanglement, superposition, and other quantum fundamental concepts, can provide substantial processing advantages over traditional computing. These quantum features help solve many complex problems that cannot be solved otherwise with conventional computing methods. These problems include modeling quantum mechanics, logistics, chemical-based advances, drug design, statistical science, susta
80
abstract match / claim overlap
arxiv
2024-03-04
0 cites
Cova T, Vitorino C, Ferreira M, Nunes S +2
Artificial intelligence (AI) consists of a synergistic assembly of enhanced optimization strategies with wide application in drug discovery and development, providing advanced tools for promoting cost-effectiveness throughout drug life cycle. Specifically, AI brings together the potential to improve drug approval rates, reduce development costs, get medications to patients faster, and help patients complying with their treatments. Accelerated pha
77
abstract match / claim overlap
pubmed
2022-01-01
0 cites
Mombo-Ngoma G, Ramharter M, Zoleko Manego R, Lell B +7
Malaria remains a preventable and treatable disease; however, recent efforts to reduce mortality have plateaued. Although artemisinin-based combination therapy demonstrates high efficacy in controlled clinical settings, its real-world effectiveness is often compromised by suboptimal patient adherence. Specifically, the artemether-lumefantrine regimen, administered twice daily over 3 days, has been associated with reduced compliance due to its com
75
abstract match
europe-pmc
2025-09-30
0 cites
Ntissi HH, Itaeli A, Sangeda RZ, Bwire GM.
<h4>Background</h4>Malaria remains a major public health burden in Tanzania, where Plasmodium falciparum accounts for 96% of infections and children under five years experience the highest mortality. The emergence of kelch13 mutations and partial resistance to artemisinin derivatives poses a threat to the sustainability of artemisinin-based combination therapy (ACT). Reliance on artemether-lumefantrine (ALU) as the dominant first-line treatment i
73
abstract match
europe-pmc
2025-12-04
0 cites
Xie SC, Dogovski C, Hanssen E, Chiu F +8
Current first-line artemisinin antimalarials are threatened by the emergence of resistant Plasmodium falciparum. Decreased sensitivity is evident in the initial (early ring) stage of intraerythrocytic development, meaning that it is crucial to understand the action of artemisinins at this stage. Here, we examined the roles of iron (Fe) ions and haem in artemisinin activation in early rings using Fe ion chelators and a specific haemoglobinase inhi
71
title match / abstract match
pubmed
2016-01-14
0 cites
Samuel R. Friedman, E. Pouget, M. Sandoval, Georgios K. Nikolopoulos +3
Large-scale structural interventions and “Big Events” like revolutions, wars and major disasters can affect HIV transmission by changing the sizes of at-risk populations, making high-risk behaviors more or less likely, or changing contexts in which risk occurs. This paper describes new measures to investigate hypothesized pathways that could connect macro-social changes to subsequent HIV transmission. We developed a “menu” of novel scales and ind
66
title match / abstract match
semantic-scholar
2019-01-01
9 cites
Unknown authors
Decision letter: Plasmodium falciparum K13 mutations in Africa and Asia impact artemisinin resistance and parasite fitness was ingested from crossref.
61
title match
crossref
2021-03-03
0 cites
Zaw Lin, Myo Zaw
Molecular Determinants of Artemisinin Resistance in k13 Gene of Plasmodium falciparum was ingested from crossref.
60
title match
crossref
2015-01-10
2 cites
Luana C Mathieu, Horace Cox, Angela M Early, Sachel Mok +12
Author response: Local emergence in Amazonia of Plasmodium falciparum k13 C580Y mutants associated with in vitro artemisinin resistance was ingested from crossref.
60
title match
crossref
2020-01-21
1 cites
Unknown authors
Decision letter: Local emergence in Amazonia of Plasmodium falciparum k13 C580Y mutants associated with in vitro artemisinin resistance was ingested from crossref.
60
title match
crossref
2019-11-09
0 cites
Adegoke TM, Nji AM, Silal SP, Ali IM +13
<h4>Background</h4>Malaria continues to pose a major public health challenge in sub-Saharan Africa (SSA), where more than 95% of global cases and deaths occur. Despite WHO Global Technical Strategy for Malaria (GTS) targeting a 90% reduction in malaria mortality by 2030, progress is hindered by persistent transmission conditions, fragile health systems, and emerging resistance to drugs and insecticides. Epidemiological models are increasingly app
54
abstract match
europe-pmc
2026-03-24
0 cites
Suvvari TK, Konakanchi VSBP, Muppavarapu RS, Arigapudi N
Quantum computing is poised to revolutionize biomedicine and healthcare, offering computational advantages that surpass classical and artificial intelligence-based approaches. Its ability to process complex biological data, simulate molecular interactions, and optimize drug discovery presents unprecedented opportunities for personalized medicine and disease modeling. Quantum algorithms can enhance genomic analysis, accelerating diagnostics and th
53
abstract match
pubmed
2025-03-31
0 cites
Jessica Reszel, Olivia Daub, Sandra I Dunn, Christine E. Cassidy +6
Maternal-newborn care does not always align with the best available evidence. Applying implementation science to change initiatives can help move evidence-informed practices into clinical settings. However, it remains unknown to what extent current implementation practices in maternal-newborn care align with recommendations from implementation science, and how confident nurses, other health professionals, and leaders are completing steps in the i
52
title match / abstract match
semantic-scholar
2025-01-01
2 cites
Cho CJ, Brown JW, Mills JC.
A pervasive view is that undifferentiated stem cells are alone responsible for generating all other cells and are the origins of cancer. However, emerging evidence demonstrates fully differentiated cells are plastic, can be coaxed to proliferate, and also play essential roles in tissue maintenance, regeneration, and tumorigenesis. Here, we review the mechanisms governing how differentiated cells become cancer cells. First, we examine the unique c
51
title match / abstract match
europe-pmc
2024-05-21
16 cites
Pengxing Cao, Nectarios Klonis, Sophie Zaloumis, David S. Khoury +5
Falciparum malaria is a major parasitic disease causing widespread morbidity and mortality globally. Artemisinin derivatives---the most effective and widely-used antimalarials that have helped reduce the burden of malaria by 60% in some areas over the past decade---have recently been found to induce growth retardation of blood-stage Plasmodium falciparum when applied at clinically relevant concentrations. To date, no model has been designed to qu
50
title match / abstract match
arxiv
2017-01-19
0 cites
Hyunjin Shim
CRISPR-Cas systems are an adaptive immunity that protects prokaryotes against foreign genetic elements. Genetic templates acquired during past infection events enable DNA-interacting enzymes to recognize foreign DNA for destruction. Due to the programmability and specificity of these genetic templates, CRISPR-Cas systems are potential alternative antibiotics that can be engineered to self-target antimicrobial resistance genes on the chromosome or
48
abstract match
arxiv
2022-02-15
0 cites
Zeleke AJ, Fola AA, Tollefson GA, Niaré K +11
Artemisinin resistant kelch13 R622I and RDT negativity approaching predominance in northern Ethiopia and emerging C580Y of African origin threaten falciparum malaria control. was ingested from pubmed.
45
title match
pubmed
2025-06-23
0 cites
C. Micallef, K. Tsipi, S. Burridge, C. Benney +3
Abstract Background To engage with the public during World Antimicrobial Resistance Awareness Week (WAAW) 2024, several UK local, regional and national organizations, comprising Health Innovation East, Cambridgeshire & Peterborough ICS, Antibiotic Research UK (ANTRUK), and NHSE East of England (EOE), came together and launched an e-platform containing an interactive quiz. This project provided a digital, collaborative and cost-effective way of ha
44
title match / abstract match
semantic-scholar
2025-01-01
0 cites
Yang Yue, Joseph Z. Shyu
Abstract: This article offers a comprehensive analysis of Artificial General Intelligence (AGI) development through a humanistic lens. Utilizing a wide array of academic and industry resources, it dissects the technological and ethical complexities inherent in AGI's evolution. Specifically, the paper underlines the societal and individual implications of AGI and argues for its alignment with human values and interests. Purpose: The study aims to
43
title match / abstract match
semantic-scholar
2023-01-01
5 cites
Ghazi Vakili M, Gorgulla C, Snider J, Nigam A +21
We introduce a quantum-classical generative model for small-molecule design, specifically targeting KRAS inhibitors for cancer therapy. We apply the method to design, select and synthesize 15 proposed molecules that could notably engage with KRAS for cancer therapy, with two holding promise for future development as inhibitors. This work showcases the potential of quantum computing to generate experimentally validated hits that compare favorably
40
abstract match / claim overlap
pubmed
2025-11-30
0 cites
Asokan S, Damilare II, Kumar S, Pandey RK +6
Emerging infectious diseases have risen significantly in the twenty-first century as ecological disruption, climate change, expanding human-animal interfaces, and global mobility intensify opportunities for pathogen transmission. This review synthesizes historical and contemporary evidence across viral, bacterial, fungal, and parasitic threats to characterize how diverse pathogens emerge and spread. Foundational events such as the 1918 influenza
39
abstract match / claim overlap
pubmed
2026-03-31
0 cites
Michael Hammond
This final chapter looks back on what is meant by theory and theorising and suggests ways in which we can improve the way we theorise technology in education. It contains a proposal for a more distinctively educational research community focused on a critical exploration of digital tools and their contribution to education.
36
title match / abstract match
crossref
2023-05-31
0 cites
Karanja Evanson Mwangi, Lawrence Xavier Thuku, John Patrick Kangethe
Increased usage of the internet has contributed immensely to the growth of software development practice in East Africa. This paper investigates the existence of formal KM (Knowledge Management) initiatives in the Software industry such as creation of virtual communities (Communities of practice and communities of interest); expert localization and establishment of knowledge taxonomies in these communities; the knowledge transfer and sharing proc
33
title match / abstract match
arxiv
2015-04-08
0 cites
Daniel J Buysse, C. Reynolds, T. Monk, S. Berman +1
The Pittsburgh Sleep Quality Index: a new instrument for psychiatric practice and research. was ingested from semantic-scholar.
30
title match / high citation count
semantic-scholar
1989-01-01
32449 cites
A. Benjafield, N. Ayas, P. Eastwood, R. Heinzer +11
Summary Background There is a scarcity of published data on the global prevalence of obstructive sleep apnoea, a disorder associated with major neurocognitive and cardiovascular sequelae. We used publicly available data and contacted key opinion leaders to estimate the global prevalence of obstructive sleep apnoea. Methods We searched PubMed and Embase to identify published studies reporting the prevalence of obstructive sleep apnoea based on obj
28
abstract match / high citation count
semantic-scholar
2019-01-01
3078 cites
Jitthai N
Migration is an important global issue as poorly managed migration can result in a diversity of problems, including an increase in the transmission of diseases such as malaria. There is evidence to suggest that malaria is no longer a forest-dependent disease and may largely be affected by population movements, mostly to agricultural areas. While internal and transnational migration has different legal implications in most countries, both types of
27
abstract match / claim overlap
pubmed
2013-01-01
0 cites
Kazmi J, Ahmad W, Naqi M, Abbas Y +6
The exponential demand for energy-efficient and adaptive computing architectures drives the evolution of artificial intelligence (AI) and machine learning (ML). Neuromorphic computing, inspired by biological neural networks, overcomes the limitations of traditional von Neumann architectures, including high energy consumption and limited scalability. The introduction of two-dimensional (2D) materials, such as transition metal dichalcogenides, hexa
26
abstract match
europe-pmc
2026-06-24
0 cites
Gunji YP, Nakamura K, Sasai K, Tani I +4
Artificial intelligence is typically formulated as an information-processing system composed of artificial neurons, where computation is understood as recursive operations connecting inputs and outputs. However, real neural systems are materially embodied and continuously reconfigured by metabolic and physical processes, suggesting that computation cannot be reduced to fixed causal structures. In this paper, we propose a theoretical framework tha
26
abstract match
europe-pmc
2026-04-28
0 cites
Gao-De Li
As a cheap and safe antimalarial agent, chloroquine (CQ) has been used in the battle against malaria for more than half century. However, the mechanism of CQ action and resistance in Plasmodium falciparum remains elusive. Based on further analysis of our published experimental results, we propose that the mechanism of CQ action and resistance might be closely linked with cell-cycle-associated amplified genomic-DNA fragments (CAGFs, singular form
26
title match / abstract match
arxiv
2017-02-07
0 cites
Liao Y Chen
Plasmodium falciparum is the parasite that causes the most severe form of malaria. Currently, science has been established about its cellular structures, its metabolic processes, and even the molecular structures of its intrinsic membrane proteins responsible for transporting water, nutrient, and waste molecules across the parasite plasma membrane (PPM). I hypothesize that Plasmodium falciparum has an Achilles' heel that can be attacked with eryt
26
abstract match
arxiv
2013-05-21
0 cites
Arthur Lupia
From this point of the book forward, I ask you to think about the challenges described in chapter 1 from a civic educator’s perspective. That is, consider the perspective of a person who wants to increase other people’s knowledge about politics or their competence at a politically relevant task. With that perspective in mind, I first convey a few important facts about civic educators and their aspirations. Next, I present a plan for helping many
24
title match / abstract match
crossref
2016-01-07
4 cites
Montag C, Neuwirth RJ, Liebherr M.
<p>Artificial intelligence (AI) has become a major topic of public and scientific debate, whereas public perceptions of quantum computing (QC) remain less understood. In the present study, we aimed to understand if people have different views on AI vs. QC, while also asking them about their perceived knowledge levels in these two domains. Further, we investigated the construct of technology self-efficacy to consider how people in general think th
24
abstract match
europe-pmc
2026-07-01
0 cites
Nora Aguirre-Celis, Risto Miikkulainen
What AI Can Do for Neuroscience: Understanding How the Brain Represents Word Meanings was ingested from crossref.
23
title match
crossref
2023-06-21
0 cites
B. Moss
Explanations, explanations, explanations: how do patients with limited English construct narrative accounts in multi-lingual, multi-ethnic settings, and how can GPs interpret them? was ingested from crossref.
22
title match
crossref
2005-05-16
15 cites
Palakh Jain, Chavi Asrani, Tinu Jain
Resistance to Change in an Organization was ingested from semantic-scholar.
21
title match
semantic-scholar
2018-01-01
6 cites
Mason GM, Lokhandwala S, Riggins T, Spencer RMC
Sleep and human cognitive development. was ingested from pubmed.
21
title match
pubmed
2021-06-01
0 cites
Christine Pourcel
New Insights into CRISPR Arrays was ingested from crossref.
20
title match
crossref
2020-12-01
1 cites
David Fajardo-Ortiz, Stefan Hornbostel, Maywa Montenegro-de-Wit, Annie Shattuck
CRISPR/Cas has the potential to revolutionize medicine, agriculture, and biology. Understanding the trajectory of CRISPR research, how it is influenced and who pays for it, is an essential research policy question. We use a combination of methods to map, via quantitative content analysis of CRISPR papers, the research funding profile of major government agencies and organizations philanthropic, and the networks involved in supporting key stages o
20
abstract match
arxiv
2020-09-24
0 cites
Unknown authors
China Shows What Economic Liberalism Can Do was ingested from crossref.
20
title match
crossref
2019-10-15
0 cites
Yang C, Zhang H, Zhou R, Qian D +4
Polymorphisms of Plasmodium falciparum k13-propeller gene among migrant workers returning to Henan Province, China from Africa. was ingested from pubmed.
20
title match
pubmed
2017-08-10
0 cites
Gianluca Truda
This paper applies statistical learning techniques to an observational Quantified-Self (QS) study to build a descriptive model of sleep quality. A total of 472 days of my sleep data was collected with an Oura ring and combined with lifestyle, environmental, and psychological data. Such n-of-1 QS projects pose a number of challenges: heterogeneous data sources; missing values; high dimensionality; dynamic feedback loops; human biases. This paper d
19
abstract match
arxiv
2021-05-14
0 cites
Kim D, Woodbury SM, Ahern W, Tischer D +12
De novo enzyme design seeks to build proteins containing ideal active sites with catalytic residues surrounding and stabilizing the transition state(s) of the target chemical reaction 1-7 . The generative artificial intelligence method RFdiffusion 8,9 solves this problem, but requires specifying both the sequence position and backbone coordinates for each catalytic residue, limiting sampling. Here we introduce RFdiffusion2, which eliminates
17
abstract match
pubmed
2025-12-31
0 cites
Photis Lysandrou
If the euro is to seriously rival the dollar as an international currency, the size of the eurozone’s capital markets must match those of the United States. The eurozone’s bond markets present a particularly acute problem in this context because far from closing the size gap with the US bond markets, that gap continues to widen considerably. This chapter will argue that to reverse this situation, two things above all else are required. First, tha
17
title match
crossref
2025-02-24
0 cites
X. M. Zhong, X. L. Zou, A. D. Liu, Y. T. Song +24
I-mode is a promising regime for future fusion reactors due to the high energy confinement and the moderate particle confinement. However, the effect of lithium, which has been widely applied for particle recycling and impurity control, on I-mode plasma is still unclear. Recently, experiments of real-time lithium powder injection on I-mode plasma have been carried out in EAST Tokamak. It was found that the confinement performance of the I-mode ca
16
abstract match
arxiv
2024-04-11
0 cites
Haoqi Sun, Wolfgang Ganglberger, Ezhil Panneerselvam, Michael J. Leone +6
Study Objective: Sleep is reflected not only in the electroencephalogram but also in heart rhythms and breathing patterns. Therefore, we hypothesize that it is possible to accurately stage sleep based on the electrocardiogram (ECG) and respiratory signals. Methods: Using a dataset including 8,682 polysomnographs, we develop deep neural networks to stage sleep from ECG and respiratory signals. Five deep neural networks consisting of convolutional
12
abstract match
arxiv
2019-08-29
0 cites
Contribution ladder
Enter at your real skill level.
Cathedral separates useful research work from credentials. Beginners produce traceable evidence; specialists validate interpretation; agents handle repeatable sweeps under human approval.
1. beginnerhuman-checked
Audit the evidence map
Read abstracts and verify country, year, K13 mutation, treatment regimen, and measured outcome. No biology training is required.
Deliverable
A checked extraction sheet covering 8 relevant papers from 4 sources.
Validation: A malaria researcher reviews disputed labels; every row retains a source link.
2. analysthuman-checked
Map where resistance signals diverge
Compare mutation prevalence, delayed-clearance measures, and treatment outcomes across East African locations and years.
Deliverable
A country-by-year evidence table with missing-data flags and contradiction notes.
Validation: Cathedral cross-checks values against the quoted passage and a second reviewer confirms exceptions.
3. specialisthuman-checked
Challenge the strongest mechanism
Evaluate whether K13 structure, parasite stress responses, partner-drug resistance, or transmission fitness best explains the observed pattern.
Deliverable
A falsifiable mechanism comparison and the smallest decisive experiment or analysis.
Validation: Domain experts score assumptions, feasibility, and whether the proposed test separates rival explanations.
4. agenthuman-checked
Run a monitored evidence sweep
Delegate citation chasing, mutation normalization, contradictory-result detection, and weekly literature surveillance to Cathedral agents.
Deliverable
A traceable update bundle with sources, extracted claims, uncertainty, and changes since the previous run.
Validation: Nothing becomes project evidence until a person approves the agent output.
Beginner evidence audit
Turn reading into reviewable research data.
Open each source, record only what it explicitly reports, then mark it checked. Empty cells are useful: they expose what the paper or metadata did not provide.
0 source-checked
Paper
Study setting
Mutation / regimen
Measured outcome
Verified
europe-pmc
arxiv
crossref
pubmed
europe-pmc
crossref
Use this answer
Save or decompose immediately.
Intelligence layer
What Cathedral can do next.
Collision alerts
Collision alert: Consciousness x 5. Does Mentality Require Consciousness?
Cathedral found a high-similarity structural echo between Consciousness (Philosophy, Cognitive Science, Neuroscience, Artificial Intelligence) and the paper "5. Does Mentality Require Consciousness?" from crossref. The vector match score was 0.232. Treat this as a candidate collision: a human should validate whether the shared structure is novel, already known, or merely lexical overlap.
Contradiction watch
No contradictions flagged yet.
Cathedral will surface cross-paper conflicts once more assumptions are extracted.
Wrong language detector
Percolation and network phase transitions
Clustered nonlinearity suggests threshold behavior rather than independent rider decisions.